No. words: 1183; after pruning: 1157


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:538)  527  0.00 0.00 0.00  BE426418Td04P146A04P129E081R1_014.ab1        1   539 (56)  C BE426418Td04P146A04P129E081F1_014.ab1   (49)   539     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE426418Td04P146A04P129E081F1_014.ab1   588 
  297    BE426418Td04P146A04P129E081R1_014.ab1   248 
  417  C BE426418Td04P146A04P129E081F1_014.ab1   172 
  433    BE426418Td04P146A04P129E081R1_014.ab1   384 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0