No. words: 1019; after pruning: 993


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:362)  346  0.00 0.00 0.28  BE426763Ld04P067C02P067C081F1_035.ab1        1   363 (177)  C BE426763Ld04P067C02P067C081R1_035.ab1   (117)   362     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C BE426763Ld04P067C02P067C081R1_035.ab1   479 
  153    BE426763Ld04P067C02P067C081F1_035.ab1    36 
  157  C BE426763Ld04P067C02P067C081R1_035.ab1   323 
  217    BE426763Ld04P067C02P067C081F1_035.ab1   100 
  257  C BE426763Ld04P067C02P067C081R1_035.ab1   223 
  273    BE426763Ld04P067C02P067C081F1_035.ab1   156 
  317  C BE426763Ld04P067C02P067C081R1_035.ab1   163 
  329    BE426763Ld04P067C02P067C081F1_035.ab1   212 
  385  C BE426763Ld04P067C02P067C081R1_035.ab1    95 
  393    BE426763Ld04P067C02P067C081F1_035.ab1   276 
  401  C BE426763Ld04P067C02P067C081R1_035.ab1    79 
  405    BE426763Ld04P067C02P067C081F1_035.ab1   288 
  425  C BE426763Ld04P067C02P067C081R1_035.ab1    55 
  433    BE426763Ld04P067C02P067C081F1_035.ab1   316 
  437  C BE426763Ld04P067C02P067C081R1_035.ab1    43 
  445    BE426763Ld04P067C02P067C081F1_035.ab1   328 
  457  C BE426763Ld04P067C02P067C081R1_035.ab1    23 
  465    BE426763Ld04P067C02P067C081F1_035.ab1   348 
Contig length: old 656, new 657

Contig length: old 657, new 657
New start: 0