No. words: 1021; after pruning: 995


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:389)  373  0.00 0.26 0.26  BE426763Ld05P067C02P067C081F1_033.ab1        1   390 (130)  C BE426763Ld05P067C02P067C081R1_033.ab1   (111)   390     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1  C BE426763Ld05P067C02P067C081R1_033.ab1   501 
  167    BE426763Ld05P067C02P067C081F1_033.ab1    55 
  187  C BE426763Ld05P067C02P067C081R1_033.ab1   315 
  195    BE426763Ld05P067C02P067C081F1_033.ab1    83 
  203  C BE426763Ld05P067C02P067C081R1_033.ab1   299 
  207    BE426763Ld05P067C02P067C081F1_033.ab1    95 
  235  C BE426763Ld05P067C02P067C081R1_033.ab1   267 
  255    BE426763Ld05P067C02P067C081F1_033.ab1   143 
  287  C BE426763Ld05P067C02P067C081R1_033.ab1   215 
  295    BE426763Ld05P067C02P067C081F1_033.ab1   183 
  323  C BE426763Ld05P067C02P067C081R1_033.ab1   179 
  355    BE426763Ld05P067C02P067C081F1_033.ab1   243 
  367  C BE426763Ld05P067C02P067C081R1_033.ab1   135 
  371    BE426763Ld05P067C02P067C081F1_033.ab1   259 
  411  C BE426763Ld05P067C02P067C081R1_033.ab1    91 
  415    BE426763Ld05P067C02P067C081F1_033.ab1   303 
  463  C BE426763Ld05P067C02P067C081R1_033.ab1    39 
  471    BE426763Ld05P067C02P067C081F1_033.ab1   359 
Contig length: old 631, new 632

Contig length: old 632, new 632
New start: 0