No. words: 1049; after pruning: 1023


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.4 (1,1:362)  346  0.00 0.00 0.28  BE426763Ld11P067C02P067C081F1_045.ab1        2   363 (182)  C BE426763Ld11P067C02P067C081R1_045.ab1   (143)   361     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  180 nodes

 92 str. conn. components

Path
    1  C BE426763Ld11P067C02P067C081R1_045.ab1   504 
  267    BE426763Ld11P067C02P067C081F1_045.ab1   125 
  279  C BE426763Ld11P067C02P067C081R1_045.ab1   226 
  355    BE426763Ld11P067C02P067C081F1_045.ab1   213 
  371  C BE426763Ld11P067C02P067C081R1_045.ab1   134 
  375    BE426763Ld11P067C02P067C081F1_045.ab1   233 
  379  C BE426763Ld11P067C02P067C081R1_045.ab1   126 
  387    BE426763Ld11P067C02P067C081F1_045.ab1   245 
  395  C BE426763Ld11P067C02P067C081R1_045.ab1   110 
  399    BE426763Ld11P067C02P067C081F1_045.ab1   257 
  411  C BE426763Ld11P067C02P067C081R1_045.ab1    94 
  415    BE426763Ld11P067C02P067C081F1_045.ab1   273 
  435  C BE426763Ld11P067C02P067C081R1_045.ab1    70 
  443    BE426763Ld11P067C02P067C081F1_045.ab1   301 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0