No. words: 1066; after pruning: 1040


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.5 (1,1:375)  354  0.00 0.53 0.27  BE426763Ld14P067C02P067C081F1_039.ab1        1   376 (175)  C BE426763Ld14P067C02P067C081R1_039.ab1   (138)   377     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  180 nodes

 92 str. conn. components

Path
    1  C BE426763Ld14P067C02P067C081R1_039.ab1   515 
  213    BE426763Ld14P067C02P067C081F1_039.ab1    73 
  221  C BE426763Ld14P067C02P067C081R1_039.ab1   295 
  373    BE426763Ld14P067C02P067C081F1_039.ab1   233 
  389  C BE426763Ld14P067C02P067C081R1_039.ab1   127 
  397    BE426763Ld14P067C02P067C081F1_039.ab1   257 
Contig length: old 690, new 691

Contig length: old 691, new 691
New start: 0