No. words: 1079; after pruning: 1053


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.1 (1,1:371)  350  0.54 0.27 0.00  BE426763Ld17P067C02P067C081F1_033.ab1        4   372 (158)  C BE426763Ld17P067C02P067C081R1_033.ab1   (179)   370     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  180 nodes

 92 str. conn. components

Path
    1  C BE426763Ld17P067C02P067C081R1_033.ab1   549 
  406    BE426763Ld17P067C02P067C081F1_033.ab1   229 
  446  C BE426763Ld17P067C02P067C081R1_033.ab1   104 
  466    BE426763Ld17P067C02P067C081F1_033.ab1   289 
Contig length: old 707, new 707

Contig length: old 707, new 707
New start: 0