No. words: 1036; after pruning: 1010


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.1 (1,1:356)  333  0.85 0.00 0.00  BE426763Ld21P067C02P067C081F1_042.ab1        5   357 (187)  C BE426763Ld21P067C02P067C081R1_042.ab1   (139)   353     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C BE426763Ld21P067C02P067C081R1_042.ab1   492 
  260    BE426763Ld21P067C02P067C081F1_042.ab1   125 
  284  C BE426763Ld21P067C02P067C081R1_042.ab1   209 
  356    BE426763Ld21P067C02P067C081F1_042.ab1   221 
  364  C BE426763Ld21P067C02P067C081R1_042.ab1   129 
  372    BE426763Ld21P067C02P067C081F1_042.ab1   237 
Contig length: old 679, new 679

Contig length: old 679, new 679
New start: 0