No. words: 890; after pruning: 850


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 4.3 (1,1:290)  252  0.00 0.36 0.36  BE438292Ld04P067A01P067A071F1_033.ab1       11   290 (172)  C BE438292Ld04P067A01P067A071R1_033.ab1   (147)   281     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C BE438292Ld04P067A01P067A071R1_033.ab1   428 
  176    BE438292Ld04P067A01P067A071F1_033.ab1    39 
  188  C BE438292Ld04P067A01P067A071R1_033.ab1   241 
  212    BE438292Ld04P067A01P067A071F1_033.ab1    75 
  228  C BE438292Ld04P067A01P067A071R1_033.ab1   201 
  236    BE438292Ld04P067A01P067A071F1_033.ab1    99 
  268  C BE438292Ld04P067A01P067A071R1_033.ab1   161 
  272    BE438292Ld04P067A01P067A071F1_033.ab1   135 
Contig length: old 599, new 599

Contig length: old 599, new 599
New start: 0