No. words: 343; after pruning: 317


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)   10   -0.6 -0.6 (1,1:129)  108  0.00 0.00 0.83  BE438292Sn26P067A01P116B031F1_024.ab1       11   130 (36)  C BE438292Sn26P067A01P116B031R1_024.ab1   (58)   119     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.6       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  58 nodes

 31 str. conn. components

Path
    1  C BE438292Sn26P067A01P116B031R1_024.ab1   177 
  135    BE438292Sn26P067A01P116B031F1_024.ab1    87 
  143  C BE438292Sn26P067A01P116B031R1_024.ab1    35 
  147    BE438292Sn26P067A01P116B031F1_024.ab1    99 
Contig length: old 213, new 214

Contig length: old 214, new 214
New start: 0