No. words: 862; after pruning: 836


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.5 (1,1:292)  290  0.00 0.00 0.00  BE442531Ld03P078B01P078B071F1_012.ab1        1   293 (124)  C BE442531Ld03P078B01P078B071R1_012.ab1   (152)   293     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1  C BE442531Ld03P078B01P078B071R1_012.ab1   445 
  336    BE442531Ld03P078B01P078B071F1_012.ab1   184 
  344  C BE442531Ld03P078B01P078B071R1_012.ab1   102 
  356    BE442531Ld03P078B01P078B071F1_012.ab1   204 
  364  C BE442531Ld03P078B01P078B071R1_012.ab1    82 
  368    BE442531Ld03P078B01P078B071F1_012.ab1   216 
Contig length: old 569, new 569

Contig length: old 569, new 569
New start: 0