No. words: 889; after pruning: 863


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:274)  262  0.00 0.36 0.36  BE442531Ld09P078B01P078B071F1_031.ab1        1   275 (186)  C BE442531Ld09P078B01P078B071R1_031.ab1   (153)   275     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C BE442531Ld09P078B01P078B071R1_031.ab1   428 
  172    BE442531Ld09P078B01P078B071F1_031.ab1    18 
  180  C BE442531Ld09P078B01P078B071R1_031.ab1   249 
  192    BE442531Ld09P078B01P078B071F1_031.ab1    38 
  200  C BE442531Ld09P078B01P078B071R1_031.ab1   229 
  280    BE442531Ld09P078B01P078B071F1_031.ab1   126 
  288  C BE442531Ld09P078B01P078B071R1_031.ab1   141 
  308    BE442531Ld09P078B01P078B071F1_031.ab1   154 
Contig length: old 614, new 615

Contig length: old 615, new 615
New start: 0