No. words: 1263; after pruning: 1237


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.2 (1,1:500)  476  0.00 0.00 0.20  BE442617Ld01P067H06P067H121F1_066.ab1        5   501 (139)  C BE442617Ld01P067H06P067H121R1_066.ab1   (127)   496     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE442617Ld01P067H06P067H121R1_066.ab1   623 
  223    BE442617Ld01P067H06P067H121F1_066.ab1   100 
  255  C BE442617Ld01P067H06P067H121R1_066.ab1   369 
  455    BE442617Ld01P067H06P067H121F1_066.ab1   332 
Contig length: old 762, new 763

Contig length: old 763, new 763
New start: 0