No. words: 1265; after pruning: 1225


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.2 (1,1:502)  478  0.00 0.00 0.20  BE442617Ld02P067H06P067H121F1_095.ab1        5   503 (137)  C BE442617Ld02P067H06P067H121R1_095.ab1   (127)   498     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C BE442617Ld02P067H06P067H121R1_095.ab1   625 
  139    BE442617Ld02P067H06P067H121F1_095.ab1    16 
  143  C BE442617Ld02P067H06P067H121R1_095.ab1   483 
  151    BE442617Ld02P067H06P067H121F1_095.ab1    28 
  159  C BE442617Ld02P067H06P067H121R1_095.ab1   467 
  163    BE442617Ld02P067H06P067H121F1_095.ab1    40 
  219  C BE442617Ld02P067H06P067H121R1_095.ab1   407 
  511    BE442617Ld02P067H06P067H121F1_095.ab1   388 
  591  C BE442617Ld02P067H06P067H121R1_095.ab1    35 
  595    BE442617Ld02P067H06P067H121F1_095.ab1   472 
Contig length: old 762, new 763

Contig length: old 763, new 763
New start: 0 
S Change at: 658; seg lengths: entry 1, contig 1