No. words: 1269; after pruning: 1243


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.7 (1,1:504)  484  0.00 0.00 0.00  BE442617Ld04P067H06P067H121F1_091.ab1        5   505 (124)  C BE442617Ld04P067H06P067H121R1_091.ab1   (139)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE442617Ld04P067H06P067H121R1_091.ab1   640 
  183    BE442617Ld04P067H06P067H121F1_091.ab1    48 
  195  C BE442617Ld04P067H06P067H121R1_091.ab1   446 
  231    BE442617Ld04P067H06P067H121F1_091.ab1    96 
  239  C BE442617Ld04P067H06P067H121R1_091.ab1   402 
  243    BE442617Ld04P067H06P067H121F1_091.ab1   108 
  295  C BE442617Ld04P067H06P067H121R1_091.ab1   346 
  327    BE442617Ld04P067H06P067H121F1_091.ab1   192 
  331  C BE442617Ld04P067H06P067H121R1_091.ab1   310 
  511    BE442617Ld04P067H06P067H121F1_091.ab1   376 
Contig length: old 764, new 764

Contig length: old 764, new 764
New start: 0