No. words: 1260; after pruning: 1234


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:497)  471  0.40 0.00 0.20  BE442617Ld06P067H06P067H121F1_087.ab1        1   498 (126)  C BE442617Ld06P067H06P067H121R1_087.ab1   (139)   497     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE442617Ld06P067H06P067H121R1_087.ab1   636 
  163    BE442617Ld06P067H06P067H121F1_087.ab1    24 
  171  C BE442617Ld06P067H06P067H121R1_087.ab1   466 
  467    BE442617Ld06P067H06P067H121F1_087.ab1   328 
Contig length: old 762, new 763

Contig length: old 763, new 763
New start: 0