No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:509)  488  0.00 0.00 0.20  BE442617Ld09P067H06P067H121F1_086.ab1        1   510 (126)  C BE442617Ld09P067H06P067H121R1_086.ab1   (128)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C BE442617Ld09P067H06P067H121R1_086.ab1   637 
  196    BE442617Ld09P067H06P067H121F1_086.ab1    68 
  208  C BE442617Ld09P067H06P067H121R1_086.ab1   430 
  520    BE442617Ld09P067H06P067H121F1_086.ab1   392 
  596  C BE442617Ld09P067H06P067H121R1_086.ab1    42 
  600    BE442617Ld09P067H06P067H121F1_086.ab1   472 
Contig length: old 763, new 764

Contig length: old 764, new 764
New start: 0