No. words: 1147; after pruning: 1121


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:362)  345  0.00 0.27 0.55  BE442638Ld01P103D03P103F091F1_070.ab1        1   364 (237)  C BE442638Ld01P103D03P103F091R1_070.ab1   (183)   363     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C BE442638Ld01P103D03P103F091R1_070.ab1   546 
  209    BE442638Ld01P103D03P103F091F1_070.ab1    25 
  213  C BE442638Ld01P103D03P103F091R1_070.ab1   334 
  245    BE442638Ld01P103D03P103F091F1_070.ab1    61 
  253  C BE442638Ld01P103D03P103F091R1_070.ab1   294 
  257    BE442638Ld01P103D03P103F091F1_070.ab1    73 
  265  C BE442638Ld01P103D03P103F091R1_070.ab1   282 
  269    BE442638Ld01P103D03P103F091F1_070.ab1    85 
  277  C BE442638Ld01P103D03P103F091R1_070.ab1   270 
  285    BE442638Ld01P103D03P103F091F1_070.ab1   101 
  321  C BE442638Ld01P103D03P103F091R1_070.ab1   226 
  325    BE442638Ld01P103D03P103F091F1_070.ab1   141 
  329  C BE442638Ld01P103D03P103F091R1_070.ab1   218 
  341    BE442638Ld01P103D03P103F091F1_070.ab1   157 
Contig length: old 784, new 785

Contig length: old 785, new 785
New start: 0