No. words: 1135; after pruning: 1095


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.5 (1,1:362)  348  0.00 0.28 0.28  BE442638Ld02P103D03P103F091F1_068.ab1        1   363 (191)  C BE442638Ld02P103D03P103F091R1_068.ab1   (218)   363     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C BE442638Ld02P103D03P103F091R1_068.ab1   581 
  249    BE442638Ld02P103D03P103F091F1_068.ab1    30 
  253  C BE442638Ld02P103D03P103F091R1_068.ab1   329 
  285    BE442638Ld02P103D03P103F091F1_068.ab1    66 
  309  C BE442638Ld02P103D03P103F091R1_068.ab1   273 
  325    BE442638Ld02P103D03P103F091F1_068.ab1   106 
  361  C BE442638Ld02P103D03P103F091R1_068.ab1   221 
  365    BE442638Ld02P103D03P103F091F1_068.ab1   146 
  373  C BE442638Ld02P103D03P103F091R1_068.ab1   209 
  381    BE442638Ld02P103D03P103F091F1_068.ab1   162 
Contig length: old 772, new 773

Contig length: old 773, new 773
New start: 0 
S Change at: 713; seg lengths: entry 1, contig 1