No. words: 1054; after pruning: 1028


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.1 (1,1:354)  337  0.00 0.28 0.56  BE442638Ld12P103D03P103F091F1_094.ab1        1   356 (181)  C BE442638Ld12P103D03P103F091R1_094.ab1   (162)   355     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C BE442638Ld12P103D03P103F091R1_094.ab1   517 
  216    BE442638Ld12P103D03P103F091F1_094.ab1    53 
  224  C BE442638Ld12P103D03P103F091R1_094.ab1   294 
  228    BE442638Ld12P103D03P103F091F1_094.ab1    65 
  248  C BE442638Ld12P103D03P103F091R1_094.ab1   270 
  256    BE442638Ld12P103D03P103F091F1_094.ab1    93 
  292  C BE442638Ld12P103D03P103F091R1_094.ab1   226 
  296    BE442638Ld12P103D03P103F091F1_094.ab1   133 
  300  C BE442638Ld12P103D03P103F091R1_094.ab1   218 
  308    BE442638Ld12P103D03P103F091F1_094.ab1   145 
Contig length: old 699, new 700

Contig length: old 700, new 700
New start: 0