No. words: 1092; after pruning: 1066


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:387)  374  0.00 0.00 0.26  BE442658Ld14P067G06P067G121F1_052.ab1        1   388 (145)  C BE442658Ld14P067G06P067G121R1_052.ab1   (172)   387     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  192 nodes

 98 str. conn. components

Path
    1  C BE442658Ld14P067G06P067G121R1_052.ab1   559 
  220    BE442658Ld14P067G06P067G121F1_052.ab1    48 
  224  C BE442658Ld14P067G06P067G121R1_052.ab1   336 
  240    BE442658Ld14P067G06P067G121F1_052.ab1    68 
  256  C BE442658Ld14P067G06P067G121R1_052.ab1   304 
  272    BE442658Ld14P067G06P067G121F1_052.ab1   100 
  276  C BE442658Ld14P067G06P067G121R1_052.ab1   284 
  288    BE442658Ld14P067G06P067G121F1_052.ab1   116 
  292  C BE442658Ld14P067G06P067G121R1_052.ab1   268 
  308    BE442658Ld14P067G06P067G121F1_052.ab1   136 
Contig length: old 704, new 705

Contig length: old 705, new 705
New start: 0