No. words: 705; after pruning: 679


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 3.2 (1,1:303)  272  1.34 0.34 0.00  BE442658Td01P067G06P108A021F1_079.ab1        1   298 (51)  C BE442658Td01P067G06P108A021R1_079.ab1   (51)   305     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  138 nodes

 71 str. conn. components

Path
    1  C BE442658Td01P067G06P108A021R1_079.ab1   356 
   77    BE442658Td01P067G06P108A021F1_079.ab1    25 
   81  C BE442658Td01P067G06P108A021R1_079.ab1   276 
  113    BE442658Td01P067G06P108A021F1_079.ab1    61 
  125  C BE442658Td01P067G06P108A021R1_079.ab1   232 
  141    BE442658Td01P067G06P108A021F1_079.ab1    89 
Contig length: old 401, new 401

Contig length: old 401, new 401
New start: 0