No. words: 1780; after pruning: 1740


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.6 (1,1:897)  844  0.11 0.00 0.00  BE442818As01P129G02P129G081F1_040.ab1       11   892 (0)  C BE442818As01P129G02P129G081R1_040.ab1   (0)   888     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  440 nodes

 222 str. conn. components

Path
    1    BE442818As01P129G02P129G081F1_040.ab1     1 
  635  C BE442818As01P129G02P129G081R1_040.ab1   264 
  663    BE442818As01P129G02P129G081F1_040.ab1   663 
  667  C BE442818As01P129G02P129G081R1_040.ab1   232 
Contig length: old 898, new 898

Contig length: old 898, new 898
New start: 0