No. words: 1073; after pruning: 1047


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.2 (1,1:499)  471  0.40 0.00 0.40  BE442818As02P129A03P129A091F1_057.ab1        1   496 (36)  C BE442818As02P129A03P129A091R1_057.ab1   (42)   499     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE442818As02P129A03P129A091R1_057.ab1   541 
   58    BE442818As02P129A03P129A091F1_057.ab1    16 
   74  C BE442818As02P129A03P129A091R1_057.ab1   468 
   78    BE442818As02P129A03P129A091F1_057.ab1    36 
   86  C BE442818As02P129A03P129A091R1_057.ab1   456 
   90    BE442818As02P129A03P129A091F1_057.ab1    48 
  102  C BE442818As02P129A03P129A091R1_057.ab1   440 
  106    BE442818As02P129A03P129A091F1_057.ab1    64 
  114  C BE442818As02P129A03P129A091R1_057.ab1   428 
  122    BE442818As02P129A03P129A091F1_057.ab1    80 
  126  C BE442818As02P129A03P129A091R1_057.ab1   416 
  134    BE442818As02P129A03P129A091F1_057.ab1    92 
  146  C BE442818As02P129A03P129A091R1_057.ab1   396 
  154    BE442818As02P129A03P129A091F1_057.ab1   112 
  174  C BE442818As02P129A03P129A091R1_057.ab1   368 
  438    BE442818As02P129A03P129A091F1_057.ab1   396 
  446  C BE442818As02P129A03P129A091R1_057.ab1    96 
  511    BE442818As02P129A03P129A091F1_057.ab1   469 
Contig length: old 573, new 574

Contig length: old 574, new 574
New start: 0