No. words: 1769; after pruning: 1743


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.2 (1,1:898)  831  0.11 0.00 0.00  BE442818As02P129G02P129G081F1_038.ab1       12   881 (0)  C BE442818As02P129G02P129G081R1_038.ab1   (0)   888    19 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  432 nodes

 218 str. conn. components

Path
    1    BE442818As02P129G02P129G081F1_038.ab1     1 
  631  C BE442818As02P129G02P129G081R1_038.ab1   269 
  639    BE442818As02P129G02P129G081F1_038.ab1   639 
  647  C BE442818As02P129G02P129G081R1_038.ab1   253 
  707    BE442818As02P129G02P129G081F1_038.ab1   707 
  715  C BE442818As02P129G02P129G081R1_038.ab1   185 
Contig length: old 899, new 899

Contig length: old 899, new 899
New start: 0