No. words: 1300; after pruning: 1274


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:492)  474  0.00 0.00 0.40  BE442818Ld02P129A03P129A091F1_006.ab1        1   494 (140)  C BE442818Ld02P129A03P129A091R1_006.ab1   (174)   492     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE442818Ld02P129A03P129A091R1_006.ab1   666 
  234    BE442818Ld02P129A03P129A091F1_006.ab1    60 
  238  C BE442818Ld02P129A03P129A091R1_006.ab1   429 
  278    BE442818Ld02P129A03P129A091F1_006.ab1   104 
  282  C BE442818Ld02P129A03P129A091R1_006.ab1   385 
  314    BE442818Ld02P129A03P129A091F1_006.ab1   140 
  330  C BE442818Ld02P129A03P129A091R1_006.ab1   337 
  338    BE442818Ld02P129A03P129A091F1_006.ab1   164 
  402  C BE442818Ld02P129A03P129A091R1_006.ab1   265 
  410    BE442818Ld02P129A03P129A091F1_006.ab1   236 
  422  C BE442818Ld02P129A03P129A091R1_006.ab1   245 
  430    BE442818Ld02P129A03P129A091F1_006.ab1   256 
  454  C BE442818Ld02P129A03P129A091R1_006.ab1   213 
  458    BE442818Ld02P129A03P129A091F1_006.ab1   284 
  482  C BE442818Ld02P129A03P129A091R1_006.ab1   185 
  514    BE442818Ld02P129A03P129A091F1_006.ab1   340 
  538  C BE442818Ld02P129A03P129A091R1_006.ab1   129 
  546    BE442818Ld02P129A03P129A091F1_006.ab1   372 
  550  C BE442818Ld02P129A03P129A091R1_006.ab1   117 
  562    BE442818Ld02P129A03P129A091F1_006.ab1   388 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0