No. words: 1303; after pruning: 1277


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:495)  477  0.00 0.00 0.40  BE442818Ld03P129A03P129A091F1_004.ab1        1   497 (139)  C BE442818Ld03P129A03P129A091R1_004.ab1   (172)   495     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE442818Ld03P129A03P129A091R1_004.ab1   667 
  272    BE442818Ld03P129A03P129A091F1_004.ab1   100 
  284  C BE442818Ld03P129A03P129A091R1_004.ab1   384 
  312    BE442818Ld03P129A03P129A091F1_004.ab1   140 
  316  C BE442818Ld03P129A03P129A091R1_004.ab1   352 
  320    BE442818Ld03P129A03P129A091F1_004.ab1   148 
  324  C BE442818Ld03P129A03P129A091R1_004.ab1   344 
  344    BE442818Ld03P129A03P129A091F1_004.ab1   172 
  356  C BE442818Ld03P129A03P129A091R1_004.ab1   312 
  360    BE442818Ld03P129A03P129A091F1_004.ab1   188 
  368  C BE442818Ld03P129A03P129A091R1_004.ab1   300 
  376    BE442818Ld03P129A03P129A091F1_004.ab1   204 
  396  C BE442818Ld03P129A03P129A091R1_004.ab1   272 
  416    BE442818Ld03P129A03P129A091F1_004.ab1   244 
  420  C BE442818Ld03P129A03P129A091R1_004.ab1   248 
  428    BE442818Ld03P129A03P129A091F1_004.ab1   256 
  456  C BE442818Ld03P129A03P129A091R1_004.ab1   212 
  468    BE442818Ld03P129A03P129A091F1_004.ab1   296 
  480  C BE442818Ld03P129A03P129A091R1_004.ab1   188 
  512    BE442818Ld03P129A03P129A091F1_004.ab1   340 
  520  C BE442818Ld03P129A03P129A091R1_004.ab1   148 
  528    BE442818Ld03P129A03P129A091F1_004.ab1   356 
  540  C BE442818Ld03P129A03P129A091R1_004.ab1   128 
  544    BE442818Ld03P129A03P129A091F1_004.ab1   372 
  560  C BE442818Ld03P129A03P129A091R1_004.ab1   108 
  564    BE442818Ld03P129A03P129A091F1_004.ab1   392 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0