No. words: 1291; after pruning: 1265


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:485)  464  0.00 0.00 0.61  BE442818Ld06P129A03P129A091F1_029.ab1        1   488 (137)  C BE442818Ld06P129A03P129A091R1_029.ab1   (181)   485     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE442818Ld06P129A03P129A091R1_029.ab1   666 
  273    BE442818Ld06P129A03P129A091F1_029.ab1    92 
  277  C BE442818Ld06P129A03P129A091R1_029.ab1   390 
  297    BE442818Ld06P129A03P129A091F1_029.ab1   116 
  309  C BE442818Ld06P129A03P129A091R1_029.ab1   358 
  313    BE442818Ld06P129A03P129A091F1_029.ab1   132 
  317  C BE442818Ld06P129A03P129A091R1_029.ab1   350 
  321    BE442818Ld06P129A03P129A091F1_029.ab1   140 
  329  C BE442818Ld06P129A03P129A091R1_029.ab1   338 
  341    BE442818Ld06P129A03P129A091F1_029.ab1   160 
  353  C BE442818Ld06P129A03P129A091R1_029.ab1   314 
  369    BE442818Ld06P129A03P129A091F1_029.ab1   188 
  397  C BE442818Ld06P129A03P129A091R1_029.ab1   270 
  417    BE442818Ld06P129A03P129A091F1_029.ab1   236 
  421  C BE442818Ld06P129A03P129A091R1_029.ab1   246 
  433    BE442818Ld06P129A03P129A091F1_029.ab1   252 
  441  C BE442818Ld06P129A03P129A091R1_029.ab1   226 
  485    BE442818Ld06P129A03P129A091F1_029.ab1   304 
  509  C BE442818Ld06P129A03P129A091R1_029.ab1   158 
  525    BE442818Ld06P129A03P129A091F1_029.ab1   344 
  541  C BE442818Ld06P129A03P129A091R1_029.ab1   126 
  545    BE442818Ld06P129A03P129A091F1_029.ab1   364 
  557  C BE442818Ld06P129A03P129A091R1_029.ab1   110 
  565    BE442818Ld06P129A03P129A091F1_029.ab1   384 
Contig length: old 805, new 806

Contig length: old 806, new 806
New start: 0