No. words: 1729; after pruning: 1703


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.3 (1,1:905)  789  0.00 0.00 0.00  BE442818Ld06P129G02P129G081F1_066.ab1       28   850 (0)  C BE442818Ld06P129G02P129G081R1_066.ab1   (0)   879    57 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  414 nodes

 209 str. conn. components

Path
    1    BE442818Ld06P129G02P129G081F1_066.ab1     1 
  403  C BE442818Ld06P129G02P129G081R1_066.ab1   504 
  459    BE442818Ld06P129G02P129G081F1_066.ab1   459 
  503  C BE442818Ld06P129G02P129G081R1_066.ab1   404 
  551    BE442818Ld06P129G02P129G081F1_066.ab1   551 
  591  C BE442818Ld06P129G02P129G081R1_066.ab1   316 
Contig length: old 906, new 906

Contig length: old 906, new 906
New start: 0