No. words: 1294; after pruning: 1268


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:486)  469  0.00 0.00 0.41  BE442818Ld07P129A03P129A091F1_027.ab1        1   488 (139)  C BE442818Ld07P129A03P129A091R1_027.ab1   (181)   486     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE442818Ld07P129A03P129A091R1_027.ab1   667 
  237    BE442818Ld07P129A03P129A091F1_027.ab1    56 
  241  C BE442818Ld07P129A03P129A091R1_027.ab1   427 
  273    BE442818Ld07P129A03P129A091F1_027.ab1    92 
  277  C BE442818Ld07P129A03P129A091R1_027.ab1   391 
  293    BE442818Ld07P129A03P129A091F1_027.ab1   112 
  309  C BE442818Ld07P129A03P129A091R1_027.ab1   359 
  313    BE442818Ld07P129A03P129A091F1_027.ab1   132 
  317  C BE442818Ld07P129A03P129A091R1_027.ab1   351 
  341    BE442818Ld07P129A03P129A091F1_027.ab1   160 
  397  C BE442818Ld07P129A03P129A091R1_027.ab1   271 
  401    BE442818Ld07P129A03P129A091F1_027.ab1   220 
  405  C BE442818Ld07P129A03P129A091R1_027.ab1   263 
  417    BE442818Ld07P129A03P129A091F1_027.ab1   236 
  421  C BE442818Ld07P129A03P129A091R1_027.ab1   247 
  437    BE442818Ld07P129A03P129A091F1_027.ab1   256 
  457  C BE442818Ld07P129A03P129A091R1_027.ab1   211 
  497    BE442818Ld07P129A03P129A091F1_027.ab1   316 
  541  C BE442818Ld07P129A03P129A091R1_027.ab1   127 
  545    BE442818Ld07P129A03P129A091F1_027.ab1   364 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0