No. words: 1297; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.8 (1,1:489)  459  0.82 0.00 0.21  BE442818Ld08P129A03P129A091F1_025.ab1        5   490 (144)  C BE442818Ld08P129A03P129A091R1_025.ab1   (178)   485     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE442818Ld08P129A03P129A091R1_025.ab1   663 
  274    BE442818Ld08P129A03P129A091F1_025.ab1   100 
  282  C BE442818Ld08P129A03P129A091R1_025.ab1   382 
  322    BE442818Ld08P129A03P129A091F1_025.ab1   148 
  326  C BE442818Ld08P129A03P129A091R1_025.ab1   338 
  426    BE442818Ld08P129A03P129A091F1_025.ab1   252 
  506  C BE442818Ld08P129A03P129A091R1_025.ab1   158 
  522    BE442818Ld08P129A03P129A091F1_025.ab1   348 
  562  C BE442818Ld08P129A03P129A091R1_025.ab1   102 
  566    BE442818Ld08P129A03P129A091F1_025.ab1   392 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0