No. words: 1302; after pruning: 1276


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:495)  477  0.00 0.00 0.40  BE442818Ld11P129A03P129A091F1_019.ab1        1   497 (137)  C BE442818Ld11P129A03P129A091R1_019.ab1   (173)   495     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE442818Ld11P129A03P129A091R1_019.ab1   668 
  313    BE442818Ld11P129A03P129A091F1_019.ab1   140 
  321  C BE442818Ld11P129A03P129A091R1_019.ab1   348 
  333    BE442818Ld11P129A03P129A091F1_019.ab1   160 
  337  C BE442818Ld11P129A03P129A091R1_019.ab1   332 
  413    BE442818Ld11P129A03P129A091F1_019.ab1   240 
  421  C BE442818Ld11P129A03P129A091R1_019.ab1   248 
  429    BE442818Ld11P129A03P129A091F1_019.ab1   256 
  441  C BE442818Ld11P129A03P129A091R1_019.ab1   228 
  473    BE442818Ld11P129A03P129A091F1_019.ab1   300 
  485  C BE442818Ld11P129A03P129A091R1_019.ab1   184 
  525    BE442818Ld11P129A03P129A091F1_019.ab1   352 
  541  C BE442818Ld11P129A03P129A091R1_019.ab1   128 
  545    BE442818Ld11P129A03P129A091F1_019.ab1   372 
  549  C BE442818Ld11P129A03P129A091R1_019.ab1   120 
  557    BE442818Ld11P129A03P129A091F1_019.ab1   384 
  561  C BE442818Ld11P129A03P129A091R1_019.ab1   108 
  565    BE442818Ld11P129A03P129A091F1_019.ab1   392 
Contig length: old 806, new 807

Contig length: old 807, new 807
New start: 0