No. words: 1346; after pruning: 1320


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:625)  599  0.00 0.00 0.00  BE442818Sn32P146E04P129G081F1_069.ab1        1   626 (13)  C BE442818Sn32P146E04P129G081R1_069.ab1   (81)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE442818Sn32P146E04P129G081R1_069.ab1   707 
   97    BE442818Sn32P146E04P129G081F1_069.ab1    16 
  105  C BE442818Sn32P146E04P129G081R1_069.ab1   603 
  109    BE442818Sn32P146E04P129G081F1_069.ab1    28 
  125  C BE442818Sn32P146E04P129G081R1_069.ab1   583 
  129    BE442818Sn32P146E04P129G081F1_069.ab1    48 
  157  C BE442818Sn32P146E04P129G081R1_069.ab1   551 
  161    BE442818Sn32P146E04P129G081F1_069.ab1    80 
  205  C BE442818Sn32P146E04P129G081R1_069.ab1   503 
  209    BE442818Sn32P146E04P129G081F1_069.ab1   128 
  405  C BE442818Sn32P146E04P129G081R1_069.ab1   303 
  409    BE442818Sn32P146E04P129G081F1_069.ab1   328 
  605  C BE442818Sn32P146E04P129G081R1_069.ab1   103 
  633    BE442818Sn32P146E04P129G081F1_069.ab1   552 
  641  C BE442818Sn32P146E04P129G081R1_069.ab1    67 
  657    BE442818Sn32P146E04P129G081F1_069.ab1   576 
  661  C BE442818Sn32P146E04P129G081R1_069.ab1    47 
  665    BE442818Sn32P146E04P129G081F1_069.ab1   584 
  669  C BE442818Sn32P146E04P129G081R1_069.ab1    39 
  681    BE442818Sn32P146E04P129G081F1_069.ab1   600 
  685  C BE442818Sn32P146E04P129G081R1_069.ab1    23 
  693    BE442818Sn32P146E04P129G081F1_069.ab1   612 
Contig length: old 720, new 720

Contig length: old 720, new 720
New start: 0