No. words: 1100; after pruning: 1074


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:424)  412  0.00 0.00 0.24  BE442875Ld02P003B06B12F1_037.ab1        1   425 (115)  C BE442875Ld02P003B06B12R1_037.ab1   (136)   424     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C BE442875Ld02P003B06B12R1_037.ab1   560 
  224    BE442875Ld02P003B06B12F1_037.ab1    88 
  228  C BE442875Ld02P003B06B12R1_037.ab1   333 
  244    BE442875Ld02P003B06B12F1_037.ab1   108 
  248  C BE442875Ld02P003B06B12R1_037.ab1   313 
  264    BE442875Ld02P003B06B12F1_037.ab1   128 
  272  C BE442875Ld02P003B06B12R1_037.ab1   289 
  304    BE442875Ld02P003B06B12F1_037.ab1   168 
  312  C BE442875Ld02P003B06B12R1_037.ab1   249 
  340    BE442875Ld02P003B06B12F1_037.ab1   204 
  348  C BE442875Ld02P003B06B12R1_037.ab1   213 
  360    BE442875Ld02P003B06B12F1_037.ab1   224 
  464  C BE442875Ld02P003B06B12R1_037.ab1    97 
  476    BE442875Ld02P003B06B12F1_037.ab1   340 
Contig length: old 675, new 676

Contig length: old 676, new 676
New start: 0