No. words: 1096; after pruning: 1070


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:420)  408  0.00 0.00 0.24  BE442875Ld04P003B06B12F1_053.ab1        1   421 (111)  C BE442875Ld04P003B06B12R1_053.ab1   (144)   420     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE442875Ld04P003B06B12R1_053.ab1   564 
  188    BE442875Ld04P003B06B12F1_053.ab1    44 
  196  C BE442875Ld04P003B06B12R1_053.ab1   369 
  216    BE442875Ld04P003B06B12F1_053.ab1    72 
  232  C BE442875Ld04P003B06B12R1_053.ab1   333 
  236    BE442875Ld04P003B06B12F1_053.ab1    92 
  272  C BE442875Ld04P003B06B12R1_053.ab1   293 
  292    BE442875Ld04P003B06B12F1_053.ab1   148 
  296  C BE442875Ld04P003B06B12R1_053.ab1   269 
  324    BE442875Ld04P003B06B12F1_053.ab1   180 
  328  C BE442875Ld04P003B06B12R1_053.ab1   237 
  344    BE442875Ld04P003B06B12F1_053.ab1   200 
  356  C BE442875Ld04P003B06B12R1_053.ab1   209 
  372    BE442875Ld04P003B06B12F1_053.ab1   228 
  380  C BE442875Ld04P003B06B12R1_053.ab1   185 
  396    BE442875Ld04P003B06B12F1_053.ab1   252 
  416  C BE442875Ld04P003B06B12R1_053.ab1   149 
  428    BE442875Ld04P003B06B12F1_053.ab1   284 
  468  C BE442875Ld04P003B06B12R1_053.ab1    97 
  476    BE442875Ld04P003B06B12F1_053.ab1   332 
Contig length: old 675, new 676

Contig length: old 676, new 676
New start: 0