No. words: 1094; after pruning: 1068


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:418)  402  0.00 0.24 0.24  BE442875Ld06P003B06B12F1_069.ab1        1   419 (143)  C BE442875Ld06P003B06B12R1_069.ab1   (113)   419     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C BE442875Ld06P003B06B12R1_069.ab1   532 
  160    BE442875Ld06P003B06B12F1_069.ab1    46 
  164  C BE442875Ld06P003B06B12R1_069.ab1   369 
  192    BE442875Ld06P003B06B12F1_069.ab1    78 
  200  C BE442875Ld06P003B06B12R1_069.ab1   333 
  208    BE442875Ld06P003B06B12F1_069.ab1    94 
  212  C BE442875Ld06P003B06B12R1_069.ab1   321 
  216    BE442875Ld06P003B06B12F1_069.ab1   102 
  220  C BE442875Ld06P003B06B12R1_069.ab1   313 
  232    BE442875Ld06P003B06B12F1_069.ab1   118 
  240  C BE442875Ld06P003B06B12R1_069.ab1   293 
  260    BE442875Ld06P003B06B12F1_069.ab1   146 
  268  C BE442875Ld06P003B06B12R1_069.ab1   265 
  292    BE442875Ld06P003B06B12F1_069.ab1   178 
  308  C BE442875Ld06P003B06B12R1_069.ab1   225 
  312    BE442875Ld06P003B06B12F1_069.ab1   198 
  324  C BE442875Ld06P003B06B12R1_069.ab1   209 
  340    BE442875Ld06P003B06B12F1_069.ab1   226 
  348  C BE442875Ld06P003B06B12R1_069.ab1   185 
  364    BE442875Ld06P003B06B12F1_069.ab1   250 
  376  C BE442875Ld06P003B06B12R1_069.ab1   157 
  380    BE442875Ld06P003B06B12F1_069.ab1   266 
  388  C BE442875Ld06P003B06B12R1_069.ab1   145 
  396    BE442875Ld06P003B06B12F1_069.ab1   282 
  404  C BE442875Ld06P003B06B12R1_069.ab1   129 
  420    BE442875Ld06P003B06B12F1_069.ab1   306 
Contig length: old 675, new 676

Contig length: old 676, new 676
New start: 0