No. words: 1101; after pruning: 1075


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.6 (1,1:425)  409  0.00 0.23 0.23  BE442875Ld07P003B06B12F1_081.ab1        1   426 (142)  C BE442875Ld07P003B06B12R1_081.ab1   (107)   426     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE442875Ld07P003B06B12R1_081.ab1   533 
  163    BE442875Ld07P003B06B12F1_081.ab1    55 
  167  C BE442875Ld07P003B06B12R1_081.ab1   367 
  195    BE442875Ld07P003B06B12F1_081.ab1    87 
  199  C BE442875Ld07P003B06B12R1_081.ab1   335 
  207    BE442875Ld07P003B06B12F1_081.ab1    99 
  211  C BE442875Ld07P003B06B12R1_081.ab1   323 
  215    BE442875Ld07P003B06B12F1_081.ab1   107 
  219  C BE442875Ld07P003B06B12R1_081.ab1   315 
  227    BE442875Ld07P003B06B12F1_081.ab1   119 
  235  C BE442875Ld07P003B06B12R1_081.ab1   299 
  315    BE442875Ld07P003B06B12F1_081.ab1   207 
  327  C BE442875Ld07P003B06B12R1_081.ab1   207 
  343    BE442875Ld07P003B06B12F1_081.ab1   235 
  351  C BE442875Ld07P003B06B12R1_081.ab1   183 
  363    BE442875Ld07P003B06B12F1_081.ab1   255 
  375  C BE442875Ld07P003B06B12R1_081.ab1   159 
  391    BE442875Ld07P003B06B12F1_081.ab1   283 
  407  C BE442875Ld07P003B06B12R1_081.ab1   127 
  419    BE442875Ld07P003B06B12F1_081.ab1   311 
  439  C BE442875Ld07P003B06B12R1_081.ab1    95 
  447    BE442875Ld07P003B06B12F1_081.ab1   339 
Contig length: old 675, new 676

Contig length: old 676, new 676
New start: 0