No. words: 1080; after pruning: 1054


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:423)  404  0.24 0.24 0.24  BE442875Ld08P003B06B12F1_085.ab1        1   424 (131)  C BE442875Ld08P003B06B12R1_085.ab1   (101)   424     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C BE442875Ld08P003B06B12R1_085.ab1   525 
  155    BE442875Ld08P003B06B12F1_085.ab1    53 
  159  C BE442875Ld08P003B06B12R1_085.ab1   367 
  199    BE442875Ld08P003B06B12F1_085.ab1    97 
  203  C BE442875Ld08P003B06B12R1_085.ab1   323 
  307    BE442875Ld08P003B06B12F1_085.ab1   205 
  319  C BE442875Ld08P003B06B12R1_085.ab1   207 
  335    BE442875Ld08P003B06B12F1_085.ab1   233 
  343  C BE442875Ld08P003B06B12R1_085.ab1   183 
  347    BE442875Ld08P003B06B12F1_085.ab1   245 
  367  C BE442875Ld08P003B06B12R1_085.ab1   159 
  371    BE442875Ld08P003B06B12F1_085.ab1   269 
  399  C BE442875Ld08P003B06B12R1_085.ab1   127 
  411    BE442875Ld08P003B06B12F1_085.ab1   309 
  431  C BE442875Ld08P003B06B12R1_085.ab1    95 
  435    BE442875Ld08P003B06B12F1_085.ab1   333 
Contig length: old 656, new 657

Contig length: old 657, new 657
New start: 0