No. words: 1011; after pruning: 985


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:450)  433  0.67 0.22 0.00  BE443049As01P078D01P078D071F1_080.ab1        1   451 (59)  C BE443049As01P078D01P078D071R1_080.ab1   (49)   452     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BE443049As01P078D01P078D071R1_080.ab1   501 
  349    BE443049As01P078D01P078D071F1_080.ab1   299 
  357  C BE443049As01P078D01P078D071R1_080.ab1   145 
  385    BE443049As01P078D01P078D071F1_080.ab1   335 
  401  C BE443049As01P078D01P078D071R1_080.ab1   101 
  497    BE443049As01P078D01P078D071F1_080.ab1   447 
Contig length: old 560, new 560

Contig length: old 560, new 560
New start: 0