No. words: 1254; after pruning: 1228


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:460)  453  0.00 0.00 0.00  BE443049Ld06P078D01P078D071F1_017.ab1        1   461 (187)  C BE443049Ld06P078D01P078D071R1_017.ab1   (145)   461     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE443049Ld06P078D01P078D071R1_017.ab1   606 
  277    BE443049Ld06P078D01P078D071F1_017.ab1   132 
  285  C BE443049Ld06P078D01P078D071R1_017.ab1   322 
  313    BE443049Ld06P078D01P078D071F1_017.ab1   168 
  341  C BE443049Ld06P078D01P078D071R1_017.ab1   266 
  353    BE443049Ld06P078D01P078D071F1_017.ab1   208 
  437  C BE443049Ld06P078D01P078D071R1_017.ab1   170 
  449    BE443049Ld06P078D01P078D071F1_017.ab1   304 
Contig length: old 793, new 793

Contig length: old 793, new 793
New start: 0