No. words: 1207; after pruning: 1181


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:466)  455  0.00 0.00 0.21  BE443049Ld07P078D01P078D071F1_032.ab1        1   467 (129)  C BE443049Ld07P078D01P078D071R1_032.ab1   (145)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE443049Ld07P078D01P078D071R1_032.ab1   611 
  169    BE443049Ld07P078D01P078D071F1_032.ab1    24 
  173  C BE443049Ld07P078D01P078D071R1_032.ab1   439 
  193    BE443049Ld07P078D01P078D071F1_032.ab1    48 
  197  C BE443049Ld07P078D01P078D071R1_032.ab1   415 
  205    BE443049Ld07P078D01P078D071F1_032.ab1    60 
  217  C BE443049Ld07P078D01P078D071R1_032.ab1   395 
  265    BE443049Ld07P078D01P078D071F1_032.ab1   120 
  273  C BE443049Ld07P078D01P078D071R1_032.ab1   339 
  281    BE443049Ld07P078D01P078D071F1_032.ab1   136 
  313  C BE443049Ld07P078D01P078D071R1_032.ab1   299 
  357    BE443049Ld07P078D01P078D071F1_032.ab1   212 
  417  C BE443049Ld07P078D01P078D071R1_032.ab1   195 
  441    BE443049Ld07P078D01P078D071F1_032.ab1   296 
  553  C BE443049Ld07P078D01P078D071R1_032.ab1    59 
  565    BE443049Ld07P078D01P078D071F1_032.ab1   420 
  577  C BE443049Ld07P078D01P078D071R1_032.ab1    35 
  581    BE443049Ld07P078D01P078D071F1_032.ab1   436 
Contig length: old 740, new 741

Contig length: old 741, new 741
New start: 0