No. words: 1020; after pruning: 994


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:458)  442  0.00 0.44 0.00  BE443049Tu01P078D01P078D071F1_067.ab1        1   458 (60)  C BE443049Tu01P078D01P078D071R1_067.ab1   (42)   460     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE443049Tu01P078D01P078D071R1_067.ab1   502 
   46    BE443049Tu01P078D01P078D071F1_067.ab1     4 
   50  C BE443049Tu01P078D01P078D071R1_067.ab1   453 
   60    BE443049Tu01P078D01P078D071F1_067.ab1    17 
   64  C BE443049Tu01P078D01P078D071R1_067.ab1   439 
   79    BE443049Tu01P078D01P078D071F1_067.ab1    35 
   87  C BE443049Tu01P078D01P078D071R1_067.ab1   416 
   91    BE443049Tu01P078D01P078D071F1_067.ab1    47 
  127  C BE443049Tu01P078D01P078D071R1_067.ab1   376 
  131    BE443049Tu01P078D01P078D071F1_067.ab1    87 
  139  C BE443049Tu01P078D01P078D071R1_067.ab1   364 
  151    BE443049Tu01P078D01P078D071F1_067.ab1   107 
  155  C BE443049Tu01P078D01P078D071R1_067.ab1   348 
  163    BE443049Tu01P078D01P078D071F1_067.ab1   119 
  167  C BE443049Tu01P078D01P078D071R1_067.ab1   336 
  171    BE443049Tu01P078D01P078D071F1_067.ab1   127 
  215  C BE443049Tu01P078D01P078D071R1_067.ab1   288 
  219    BE443049Tu01P078D01P078D071F1_067.ab1   175 
  231  C BE443049Tu01P078D01P078D071R1_067.ab1   272 
  235    BE443049Tu01P078D01P078D071F1_067.ab1   191 
  379  C BE443049Tu01P078D01P078D071R1_067.ab1   124 
  383    BE443049Tu01P078D01P078D071F1_067.ab1   339 
  447  C BE443049Tu01P078D01P078D071R1_067.ab1    56 
  451    BE443049Tu01P078D01P078D071F1_067.ab1   407 
  479  C BE443049Tu01P078D01P078D071R1_067.ab1    24 
  483    BE443049Tu01P078D01P078D071F1_067.ab1   439 
  487  C BE443049Tu01P078D01P078D071R1_067.ab1    16 
  491    BE443049Tu01P078D01P078D071F1_067.ab1   447 
Contig length: old 561, new 562

Contig length: old 562, new 562
New start: 0