No. words: 278; after pruning: 252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.9 -0.9 (1,1:83)   64  0.00 2.47 1.23  BE443202Ta12P053C02P053D021F1_010.ab1        1    81 (52)  C BE443202Ta12P053C02P053D021R1_010.ab1   (60)    85     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.9       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1  C BE443202Ta12P053C02P053D021R1_010.ab1   145 
   87    BE443202Ta12P053C02P053D021F1_010.ab1    25 
   99  C BE443202Ta12P053C02P053D021R1_010.ab1    47 
  107    BE443202Ta12P053C02P053D021F1_010.ab1    45 
Contig length: old 194, new 195

Contig length: old 195, new 195
New start: 0