No. words: 278; after pruning: 252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -1.2 -1.2 (1,1:84)   74  0.00 1.22 0.00  BE443202Ta13P053C02P053D021F1_008.ab1        1    82 (52)  C BE443202Ta13P053C02P053D021R1_008.ab1   (58)    86     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.2       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  40 nodes

 22 str. conn. components

Path
    1  C BE443202Ta13P053C02P053D021R1_008.ab1   144 
  104    BE443202Ta13P053C02P053D021F1_008.ab1    45 
  120  C BE443202Ta13P053C02P053D021R1_008.ab1    25 
  128    BE443202Ta13P053C02P053D021F1_008.ab1    69 
Contig length: old 193, new 193

Contig length: old 193, new 193
New start: 0