No. words: 275; after pruning: 249


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -1.6 -1.6 (1,1:91)   68  0.00 2.35 1.18  BE443202Ta23P053C02P053D021F1_019.ab1        5    89 (41)  C BE443202Ta23P053C02P053D021R1_019.ab1   (56)    89     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.6       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  36 nodes

 20 str. conn. components

Path
    1  C BE443202Ta23P053C02P053D021R1_019.ab1   145 
   97    BE443202Ta23P053C02P053D021F1_019.ab1    43 
  101  C BE443202Ta23P053C02P053D021R1_019.ab1    45 
  109    BE443202Ta23P053C02P053D021F1_019.ab1    55 
Contig length: old 183, new 184

Contig length: old 184, new 184
New start: 0