No. words: 281; after pruning: 255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.7 -0.7 (1,1:85)   73  1.20 1.20 0.00  BE443202Td05P053C02P053D021F1_007.ab1        1    83 (52)  C BE443202Td05P053C02P053D021R1_007.ab1   (59)    87     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.7       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  38 nodes

 21 str. conn. components

Path
    1  C BE443202Td05P053C02P053D021R1_007.ab1   146 
  108    BE443202Td05P053C02P053D021F1_007.ab1    48 
  112  C BE443202Td05P053C02P053D021R1_007.ab1    35 
  116    BE443202Td05P053C02P053D021F1_007.ab1    56 
Contig length: old 195, new 195

Contig length: old 195, new 195
New start: 0