No. words: 1044; after pruning: 1018


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:483)  456  0.00 0.41 0.21  BE443288Sn26P052H02P003D081F1_030.ab1        1   484 (47)  C BE443288Sn26P052H02P003D081R1_030.ab1   (28)   485     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE443288Sn26P052H02P003D081R1_030.ab1   513 
   63    BE443288Sn26P052H02P003D081F1_030.ab1    33 
   71  C BE443288Sn26P052H02P003D081R1_030.ab1   443 
  167    BE443288Sn26P052H02P003D081F1_030.ab1   137 
  171  C BE443288Sn26P052H02P003D081R1_030.ab1   343 
  231    BE443288Sn26P052H02P003D081F1_030.ab1   201 
  287  C BE443288Sn26P052H02P003D081R1_030.ab1   227 
  331    BE443288Sn26P052H02P003D081F1_030.ab1   301 
  351  C BE443288Sn26P052H02P003D081R1_030.ab1   163 
  431    BE443288Sn26P052H02P003D081F1_030.ab1   401 
  447  C BE443288Sn26P052H02P003D081R1_030.ab1    67 
  459    BE443288Sn26P052H02P003D081F1_030.ab1   429 
Contig length: old 560, new 561

Contig length: old 561, new 561
New start: 0