No. words: 1030; after pruning: 1004 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 10.0 (1,1:470) 443 0.00 0.42 0.21 BE443288Sn29P052H02P003D081F1_024.ab1 1 471 (47) C BE443288Sn29P052H02P003D081R1_024.ab1 (40) 472 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 226 nodes 115 str. conn. components Path 1 C BE443288Sn29P052H02P003D081R1_024.ab1 512 82 BE443288Sn29P052H02P003D081F1_024.ab1 40 86 C BE443288Sn29P052H02P003D081R1_024.ab1 427 114 BE443288Sn29P052H02P003D081F1_024.ab1 72 154 C BE443288Sn29P052H02P003D081R1_024.ab1 359 178 BE443288Sn29P052H02P003D081F1_024.ab1 136 214 C BE443288Sn29P052H02P003D081R1_024.ab1 299 226 BE443288Sn29P052H02P003D081F1_024.ab1 184 242 C BE443288Sn29P052H02P003D081R1_024.ab1 271 246 BE443288Sn29P052H02P003D081F1_024.ab1 204 326 C BE443288Sn29P052H02P003D081R1_024.ab1 187 342 BE443288Sn29P052H02P003D081F1_024.ab1 300 358 C BE443288Sn29P052H02P003D081R1_024.ab1 155 362 BE443288Sn29P052H02P003D081F1_024.ab1 320 458 C BE443288Sn29P052H02P003D081R1_024.ab1 55 466 BE443288Sn29P052H02P003D081F1_024.ab1 424 Contig length: old 559, new 560 Contig length: old 560, new 560 New start: 0