No. words: 1031; after pruning: 1005


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:471)  448  0.00 0.21 0.21  BE443288Ta11P052H02P003D081F1_012.ab1        1   472 (48)  C BE443288Ta11P052H02P003D081R1_012.ab1   (39)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE443288Ta11P052H02P003D081R1_012.ab1   511 
  365    BE443288Ta11P052H02P003D081F1_012.ab1   325 
  385  C BE443288Ta11P052H02P003D081R1_012.ab1   127 
  393    BE443288Ta11P052H02P003D081F1_012.ab1   353 
  445  C BE443288Ta11P052H02P003D081R1_012.ab1    67 
  465    BE443288Ta11P052H02P003D081F1_012.ab1   425 
Contig length: old 559, new 560

Contig length: old 560, new 560
New start: 0