No. words: 1055; after pruning: 1029


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:483)  455  0.00 0.41 0.21  BE443288Ta16P052H02P003D081F1_002.ab1        1   484 (48)  C BE443288Ta16P052H02P003D081R1_002.ab1   (38)   485     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE443288Ta16P052H02P003D081R1_002.ab1   523 
   73    BE443288Ta16P052H02P003D081F1_002.ab1    33 
   85  C BE443288Ta16P052H02P003D081R1_002.ab1   439 
   93    BE443288Ta16P052H02P003D081F1_002.ab1    53 
   97  C BE443288Ta16P052H02P003D081R1_002.ab1   427 
  113    BE443288Ta16P052H02P003D081F1_002.ab1    73 
  133  C BE443288Ta16P052H02P003D081R1_002.ab1   391 
  193    BE443288Ta16P052H02P003D081F1_002.ab1   153 
  205  C BE443288Ta16P052H02P003D081R1_002.ab1   319 
  405    BE443288Ta16P052H02P003D081F1_002.ab1   365 
Contig length: old 571, new 572

Contig length: old 572, new 572
New start: 0