No. words: 1043; after pruning: 1017


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:471)  453  0.00 0.21 0.00  BE443288Ta19P052H02P003D081F1_027.ab1        1   472 (57)  C BE443288Ta19P052H02P003D081R1_027.ab1   (41)   473     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE443288Ta19P052H02P003D081R1_027.ab1   514 
  114    BE443288Ta19P052H02P003D081F1_027.ab1    72 
  122  C BE443288Ta19P052H02P003D081R1_027.ab1   393 
  346    BE443288Ta19P052H02P003D081F1_027.ab1   304 
  386  C BE443288Ta19P052H02P003D081R1_027.ab1   129 
  394    BE443288Ta19P052H02P003D081F1_027.ab1   352 
  450  C BE443288Ta19P052H02P003D081R1_027.ab1    65 
  466    BE443288Ta19P052H02P003D081F1_027.ab1   424 
Contig length: old 571, new 571

Contig length: old 571, new 571
New start: 0